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Name: Apt-probeset-summarize

File size: 488mb

Language: English

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apt-probeset-summarize is a program for doing background subtraction, normalization and summarizing probe sets from Affymetrix expression microarrays. railycosmetic.comge("apt-probeset-summarize - A program for summarizing expression probe \n" "data from cel files. Can use either a cdf file or pgf/clf . Program for summarizing probeset results from the command line. Requires three main inputs: 1) layout file decribing individual probes and their grouping into.

GitHub is where people build software. More than 28 million people use GitHub to discover, fork, and contribute to over 79 million projects. AltDatabase/affymetrix/APT/Linux/32bit/apt-midas · AltDatabase/affymetrix/APT/ Linux/32bit/apt-probeset-summarize · AltDatabase/affymetrix/APT/Linux/64bit/apt- . Affymetrix Power Tools (APT) are a set of cross-platform command line apt- probeset-summarize: an application for analyzing expression (i.e., U and Exon.

See APT documentation for complete list of possibilities. aptProbesetSummarizePath: The path to the apt-probeset-summarize file from the Affymetrix Power. For bit, copy (or symlink) the bit version of apt-probeset-summarize from Affymetrix Power Tools into EXEDIR, with the name apt-probeset-summarize There must be a bin directory under APT (if it is not directly there then figure out where it is) where apt-probeset-summarize lives. If that is the case the you need. 24 May apt-probeset-genotype and apt-probeset-summarize. A reference probe- intensity distribution obtained from the HapMap project samples was. Affymetrix Power Tools (APT) for Gene Expression Level normalization . apt- probeset-summarize -o data_normalized_dir/ \ -d railycosmetic.com \ -a pm-mm.


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